1. Contradictory effects of silver nanoparticles on activated sludge wastewater treatment. Journal of hazardous materials, 2018, 341: 448-456.

2. Analysis of the functional gene structure and metabolic potential of microbial community in high arsenic groundwater. Water research, 2017, 123: 268-276.

3. Warming enhances old organic carbon decomposition through altering functional microbial communities. The ISME Journal, 2017.

4. Microbial functional diversity covaries with permafrost thaw‐induced environmental heterogeneity in tundra soil. Global change biology, 2017.

5. Enhanced decomposition of stable soil organic carbon and microbial catabolic potentials by long‐term field warming. Global Change Biology, 2017.

6. Bacteriophage–prokaryote dynamics and interaction within anaerobic digestion processes across time and space. Microbiome, 2017, 5(1): 57.

7. Alpine soil carbon is vulnerable to rapid microbial decomposition under climate cooling. The ISME journal, 2017.

8. Lateral Gene Transfer in a Heavy Metal-Contaminated-Groundwater Microbial Community. mBio, 2016, 7(2): e02234-15.

9. Warming Alters Expressions of Microbial Functional Genes Important to Ecosystem Functioning. Frontiers in Microbiology, 2016, 7:668.

10. Tundra soil carbon is vulnerable to rapid microbial decomposition under climate warming. Nature Climate Change 2016, 6(6): 595-600.

11. Integrated metagenomics and network analysis of soil microbial community of the forest timberline. SCIENTIFIC REPORTS, 2015, (5)7994.

12. Impacts of the Three Gorges Dam on microbial structure and potential function. SCIENTIFIC REPORTS, 2015, (5)8605.

13. Phylogenetic and functional gene structure shifts of the oral microbiomes in periodontitis patients. The ISME Journal, 2014, 8(9): 1879-1891.

14. Elevated nitrate enriches microbial functional genes for potential bioremediation of complexly contaminated sediments. The ISME Journal, 2014(8): 1932–1944. 

15. The microbial gene diversity along an elevation gradient of the Tibetan grassland. The ISME Journal, 2014(8): 430–440.

16. GeoChip-based analysis of microbial community of a combined nitritation-anammox reactor treating anaerobic digestion supernatant. Water Research, 2014, 67(15): 345–354.

17. GeoChip-based analysis of the microbial community functional structures in simultaneous desulfurization and denitrification process. Journal of Environmental Sciences, 2014, 26(7): 1375–1382.

18. Microbial Community Functional Structures in Wastewater Treatment Plants as Characterized by GeoChip. PloS one, 2014, 26: pone.0093422.

19. Stochasticity, succession, and environmental perturbations in a fluidic ecosystem. PNAS, 2014, 111(9): E836-E845.

20. GeoChip-based analysis of the functional gene diversity and metabolic potential of soil microbial communities of mangroves. Applied Microbiology and Biotechnology, 2013, 7(15): 7035–7048.

21. Microbial mediation of carbon-cycle feedbacks to climate warming. Nature Climate Change[J]. Nature Climate Change, 2012, 2(2): 106-110.

22. GeoChip-Based Analysis of the Functional Gene Diversity and Metabolic Potential of Microbial Communities in Acid Mine Drainage. Applied and Environmental Microbiology, 2011, 77(3): 991–999.

23. Functional Molecular Ecological Networks. mBio, 2010, 1(4): e00169-00110.

24. GeoChip 3.0: a high throughput tool for analyzing microbial community composition, structure, and functional activity. The ISME Journal, 2010, (4): 1167–1179.

25. Deep-Sea Oil Plume Enriches Indigenous Oil-Degrading Bacteria. Science, 2010, 330(6001): 204–208.

26. GeoChip-based analysis of metabolic diversity of microbial communities at the Juan de Fuca Ridge hydrothermal vent. PNAS, 2009, 106, (12):4840–4845.

27. Spatial scaling of functional gene diversity across various microbial taxa. PNAS, 2008, 105(22): 7768-7773.